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1. A microbial survey of the International Space Station (ISS)

2017. Eisen, Jonathan, Coil, David, and Lang, Jenna. Background Modern advances in sequencing technology have enabled the census of microbial members of many natural ecosystems. Recently, ... UC Davis.

2. A Strawberry Database: Geometric Properties, Images and 3D Scans

2018. Durand-Petiteville, Adrien, Sadowski, Dennis, and Vougioukas, Stavros. 1611 strawberries from different places and varieties are used to collect images, 3D scans as well as physical properties such as shape, ... UC Davis.

3. An Evaluation of the Representativity of the USDA Core Collection of Common Bean as Assessed by SNP Diversity

2019. Gepts, Paul, Kuzay, Saarah, and Hamilton, Paige. In this article, we present the results of an analysis of the genetic diversity of a USDA core collection of common bean. This collection... UC Davis.

4. Bacteria isolated from bengal cat (Felis catus × Prionailurus bengalensis) anal sac secretions produce volatile compounds associated with animal signaling

2019. Yamaguchi, Mei, Jospin, Guillaume, Ganz, Holly, Coil, David, Eisen, Jonathan, Cho, Adrienne, Zaw, Thant, McCartney, Mitchell, and Davis, Cristina. Anal sacs are an important odor producing organ found across the mammalian Order Carnivora. Secretions from the anal sac may be used as ... UC Davis.

5. Caltrans PEMS highway sensor average flows by occupancy

2018. Fitzgerald, Clark and Zhang, Michael. This data summarizes average vehicle flow as a function of occupancy for traffic sensor data available from CalTrans Performance Manageme... UC Davis.

6. Data and analysis code for "Forest recovery following extreme drought in California, USA: natural patterns and effects of pre-drought management"

2019. Young, Derek, Meyer, Marc, Estes, Becky, Gross, Shana, Wuenschel, Amarina, Restaino, Christina, and Safford, Hugh. This repository contains data and code for the paper "Forest recovery following extreme drought in California, USA: natural patterns and ... UC Davis.

7. Data associated with manuscript "Predicting wave-induced sediment resuspension at the perimeter of lakes using a steady-state spectral wave model"

2018. Roberts, Derek, Schladow, S. Geoffrey, Hook, Simon, Watanabe, Shohei, and Moreno-Casas, Patricio. This repository includes data associated with the manuscript, "Predicting wave-induced sediment resuspension at the perimeter of ... UC Davis.

8. Data deposition for Complex electrophysiological remodeling in postinfarction ischemic heart failure

2018. Hegyi, Bence and Chen-Izu, Ye. Heart failure (HF) following myocardial infarction (MI) is associated with high incidence of cardiac arrhythmias. Development of therapeu... UC Davis.

9. Data for analysis of snowmelt timing as a determinant of inflow mixing in Lake Tahoe

2017. Roberts, Derek, Watanabe, Shohei, and Schladow, S. Geoffrey. This dataset includes data files pertinent to the manuscript, "Snowmelting timing as a determinant of inflow mixing," accepted for ... UC Davis.

10. Defining hydrogel properties to instruct lineage- and cell-specific mesenchymal differentiation

2018. Leach, Kent. The maintenance and direction of stem cell lineage after implantation remains challenging for clinical translation. Aggregation and ... UC Davis.

11. Effect of Drought Stress on the Genetic Architecture of Photosynthate Allocation and Remobilization in Pods of Common Bean (Phaseolus vulgaris L.), a Key Species for Food Security

2019. Gepts, Paul, Berny Mier y Teran, Jorge Carlos, Konzen, Enéas R., Palkovic, Antonia, Tsai, Siu M., Rao, Idupulapati M., and Beebe, Stephen. Background: Common bean is the most important staple grain legume for direct human consumption and nutrition. It complements major source... UC Davis.

12. Emergence of complex institutions in a large population of self-governing communities

2019. Frey, Seth. Most aspects of our lives are governed by large, highly developed institutions that integrate several governance tasks under one ... UC Davis.

13. Evolution of SSR diversity from wild types to U.S. advanced cultivars in the Andean and Mesoamerican domestications of common bean (Phaseolus vulgaris)

2018. Gepts, Paul. Progress in common bean breeding requires the exploitation of genetic variation among market classes, races and gene pools. The present ... UC Davis.

14. Exposure to light changes soil chemical properties

2019. Doane, Timothy, Silva, Lucas, and Horwath, William. Assessment of the effect of UV and visible light on the chemical properties of soils. Raw data of chemical properties measured in a ... UC Davis.

15. Falk et al Plot Data

2018. Igel, Adele, Falk, Nicholas, and Igel, Matthew. Plot data for Falk et al 2019. Falk, N. M., A. L. Igel and M. R. Igel, 2019: The Relative Impact of Ice Fall Speeds and Microphysics ... UC Davis.

16. Genetic Patterns of Common-Bean Seed Acquisition and Early-stage Adoption among Farmer Groups in Western Uganda

2018. Gepts, Paul, Wilkus, Erin, Berny Mier y Teran, Jorge Carlos, Mukankusi, Clare, Kuzaay, Saarah, and Hamilton-Conaty, Paige. Widespread adoption of new varieties can be valuable, especially in developing countries, which tend to lack access to improved ... UC Davis.

17. Genomes From Bacteria Associated with the Canine Oral Cavity: a Test Case for Automated Genome-Based Taxonomic Assignment

2019. Coil, David, Jospin, Guillaume, Eisen, Jonathan, Darling, Aaron, Wallis, Collin, Davis, Ian, Harris, Stephen, Holcombe, Lucy, and O'Flynn, Ciaran. Taxonomy for bacterial isolates is commonly assigned via sequence analysis. However, the most common sequence-based approaches (e.g. 16S ... UC Davis.

18. Groove Loops: A Collection of Repeating Multi-Instrumental Patterns

2019. Janata, Petr. This dataset contains 456 musical stimuli used in the series of studies reported in: Janata, P., Peterson, J., Ngan, C., Keum, B., ... UC Davis.

19. Heterotrophic N2-fixation contributes to nitrogen economy of a common wetland sedge, Schoenoplectus californicus

2018. Rejmankova, Eliska, Sirova, Dagmara, Castle, Stephanie, Barta, Jiri, and Carpenter, Heather. These data sets document environmental characteristics of sampling locations of Schoenoplectus californicus, california bulrush, ... UC Davis.

20. Images of individual strawberries (entire fruit, flesh and calyx) with contrasting background

2017. Durand-Petiteville, Adrien, Vougioukas, Stavros, Slaughter, David, and Sadowski, Dennis. This database contains images of 258 individual strawberries with dark background (a setting typically encountered during post-harvest ... UC Davis.

21. Incipits for the Catalogue of the Works of Hector Berlioz, Second edition, digital

2018. Minnick, Jonathan and Holoman, D. Kern. This collection of PDFs contains all of the incipits for the Catalogue of the Works of Hector Berlioz, Second edition, digital, ... UC Davis.


2018. Peixoto, Raquel, Rosado, Phillipe, Leite, Deborah, Duarte, Gustavo, Chaloub, Ricardo, Jospin, Guillaume, Eisen, Jonathan, Bourne, David, da Rocha, Ulisses, Saraiva, João, and Dini-Andreote, Francisco. Although the early coral reef-bleaching warning system (NOAA/USA) is established, there is no feasible treatment that can minimize ... UC Davis.

23. Influence of Relative Humidity on the Heterogeneous Oxidation of Secondary Organic Aerosol

2018. Cappa, Christopher, Li, Ziyue, and Smith, Katherine. This dataset contains data from figures and model code used to generate figures in the paper "Influence of Relative Humidity on the ... UC Davis.

24. Initial application of the noise-sorted scanning clustering algorithm to the analysis of composition-dependent organic aerosol thermal desorption measurements

2019. Cappa, Christopher, Li, Ziyue, D'Ambro, Emma, Schobesberger, Siegfried, Shilling, John, Lopez-Hilfiker, Felipe, Liu, Jiumeng, Gaston, Cassandra, and Thornton, Joel. The FIGAERO-CIMS (Filter Inlet for Gases and AEROsols + chemical ionization mass spectrometer) measures thermal desorption profiles for ... UC Davis.

25. Measurement and modeling of the multi-wavelength optical properties of uncoated flame-generated soot: Data from the BC2, BC3, BC3+ and BC4 studies

2018. Forestieri, Sara and Cappa, Christopher. Optical properties of flame-generated black carbon (BC) containing soot particles were quantified at multiple wavelengths during the BC2,... UC Davis.

26. Measurements from the Fire Influence on Regional and Global Environments Experiment (FIREX) Fire Lab Mini Chamber Experiment

2019. Cappa, Christopher, Lim, Christopher, Hagan, David, and Kroll, Jesse. All experiments were conducted during the Fire Influence on Regional to Global Environments Experiment (FIREX) lab study, which took plac... UC Davis.

27. Metagenome-assembled genomes (MAG's) from two thermal pools in Uzon Caldera, Kamchatka, Russia

2018. Ettinger, Cassandra, Wilkins, Laetitia, Jospin, Guillaume, and Eisen, Jonathan. In this study we focus on two hydrothermal pools, Arkashin Shurf and Zavarzin Spring, in Uzon Caldera, Kamchatka, Russia that were ... UC Davis.

28. PffBT4T

2018. Dantanarayana, Varuni. Conformational and energetic disorder in organic semiconductors reduces charge and exciton transport because of the structural ... UC Davis.

29. Pharmaceutical Effects of Inhibiting the Soluble Epoxide Hydrolase in Canine Osteoarthritis

2019. McReynolds, Cindy, Hwang, Sung Hee, Yang, Jun, Wan, Debin, Wagner, Karen, Morisseau, Christophe, Li, Dongyang, Schmidt, William, and Hammock, Bruce. Osteoarthritis (OA) is a degenerative joint disease that causes pain and bone deterioration driven by an increase in prostaglandins and ... UC Davis.

30. PhyloSift Markers Database

2018. Jospin, Guillaume. Like all organisms on the planet, environmental microbes are subject to the forces of molecular evolution. Metagenomic sequencing provide... UC Davis.

31. PLoS One Dodder Data January 2013

2013. Farzan, Shahla. An increasing body of evidence now indicates that parasitic species can have ecosystem-level impacts on species diversity patterns, ... UC Davis.

32. Pod indehiscence is a domestication and aridity resilience trait in common bean

2019. Parker, Travis, Berny Mier y Teran, Jorge Carlos, Palkovic, Antonia, Jernstedt, Judy, and Gepts, Paul. Abstract Plant domestication has strongly modified crop morphology and development. Nevertheless, many crops continue to display some ... UC Davis.

33. Regional and disease-related differences in properties of the equine temporomandibular joint disc

2018. Cissell, Derek. Temporomandibular joint (TMJ) disorders are increasingly recognized in animals. The articular disc plays a major role in TMJ disorders in... UC Davis.

34. Signatures of Environmental Adaptation During Range Expansion of Wild Common Bean (Phaseolus vulgaris)

2019. Gepts, Paul and Gepts, Paul. Landscape genomics integrates population genetics with landscape ecology, allowing the identification of putative molecular det... UC Davis.

35. Single-Molecule Image Sequences of Trichoderma reesei Cel7A and Variants on Cellulose Fibrils

2019. Jeoh, Tina, Goodwin, Peter, and Mudinoor, Akshata. Purified and Cy5-labeled Trichoderma reesei Cel7A and its variants (Cel7A catalytic domain, catalytically deficient E212Q mutant and the ... UC Davis.

36. Sociodemographic data for battery electric vehicle owning households in California (From NCST Project "Understanding the Early Adopters of Fuel Cell Vehicles")

2019. Hardman, Scott. Sociodemographic data for battery electric vehicle owning households in California . UC Davis.

37. Soil Water Content at MMWD

2017. Hartsough, Peter. These data were collected using Decagon (Meter) GS1 sensors at two different depths, 30cm and 60cm.  Data were collected hourly and these... UC Davis.

38. Steroid concentrations in boar tissues

2018. Berger, Trish, Kucera, Heidi, Conley, Alan, and Puschner, Birgit. Synthesis and metabolism of steroids is highly interconnected within a tissue.  The initial objective of these studies was to evaluate th... UC Davis.

39. Supporting data for the manuscript: Observations and modeling of the surface seiches of Lake Tahoe, USA

2019. Roberts, Derek, Schladow, S. Geoffrey, and Forrest, Alexander. This data set was created to make the data associated with the manuscript Observations and modeling of the surface seiches of Lake ... UC Davis.

40. Temperature-Dependent Dynamics of Molecular Dopant in Conjugated Polymer

2018. Li, Jun, Murrey, Tucker, Diallo, Souleymane, and Moule, Adam. Understanding the nature of dopant dynamics in the solid state is critical for improving the longevity and stability of organic ... UC Davis.

41. Vibrational Neutron Scattering Spectra for Undoped and Doped P3HT

2018. Harrelson, Thomas, Li, Jun, and Moule, Adam. Doped semiconducting polymers have garnered vast research interest in photovoltaic, transistor, thermoelectric, and sensor applications. ... UC Davis.

42. Vibrational Neutron Spectroscopy Data for Small Molecule Organic Semiconductors

2017. Harrelson, Thomas, Dantanarayana, Varuni, Faller, Roland, and Moule, Adam. Organic semiconductors are a class of molecules that self-assemble into materials that have semiconducting properties. Recently, ... UC Davis.

43. Water uptake, cloud condensation nuclei and surface tension: results from the MadFACTS campaign

2018. Forestieri, Sara, Staudt, Sean, Kuborn, Thomas, Ruehl, Christopher, Bertram, Timothy, and Cappa, Christopher. This data set is associated with the manuscript “Establishing the Impact of Model Surfactants on Cloud Condensation Nuclei Activity of ... UC Davis.